2023

 

2022

 

2021

 

2020

Xie G, Zhang F, Leung L, Mooney MA, Epprecht L, Norton I, Rathi Y, Kikinis R, Al-Mefty O, Makris N, others. Anatomical assessment of trigeminal nerve tractography using diffusion MRI: a comparison of acquisition b-values and single-and multi-fiber tracking strategies. NeuroImage: Clinical 2020;:102160.

Zhang F, Xie G, Leung L, Mooney M, Epprecht L, Norton I, Rathi Y, Kikinis R, Al-Mefty O, Makris N, others. Creation of a novel trigeminal tractography atlas for automated trigeminal nerve identification. bioRxiv 2020;

Irimia A, Fan D, Chaudhari NN, Ngo V, Zhang F, Joshi SH, O’Donnell LJ. Mapping cerebral connectivity changes after mild traumatic brain injury in older adults using diffusion tensor imaging and Riemannian matching of elastic curves. 2020;

Zhang F, O’Donnell LJ. Support vector regression. In: Machine Learning. Academic Press; 2020 p. 123–140.

 

2019

Makris N, Rushmore JR, Wilson-Braun P, Papadimitriou G, Ng I, Rathi Y, Zhang F, O’donnell L, Kubicki M, Yeterian E, others. 3D Exploration of the Brainstem in 50-micron Resolution MRI. BioRxiv 2019;:768002.

O’Donnell LJ, Daducci A, Wassermann D, Lenglet C. Advances in computational and statistical diffusion MRI. NMR in Biomedicine 2019;32(4):e3805.

Zhang F, Hoffmann N, Karayumak SC, Rathi Y, Golby AJ, O’Donnell LJ. Deep White Matter Analysis: Fast, Consistent Tractography Segmentation Across Populations and dMRI Acquisitions. In: International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham; 2019 p. 599–608.

Levitt J, Zhang F, Vangel M, Kubicki M, Shenton M, O’donnell L. DIFFUSION MAGNETIC RESONANCE IMAGING FIBER CLUSTER ANALYSIS OF THE ANATOMIC ORGANIZATION OF FRONTOSTRIATAL STRUCTURAL CONNECTIVITY IN HEALTHY SUBJECTS. In: SCHIZOPHRENIA BULLETIN. OXFORD UNIV PRESS GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND; 2019 p. S236–S237.

Fan D, Chaudhari NN, Rostowsky KA, Calvillo M, Lee SK, Chowdhury NF, Zhang F, O’Donnell LJ, Irimia A. THE EFFECTS OF CEREBRAL MICROHEMORRHAGES ON WHITE MATTER CONNECTIVITY AND AGING IN MILD TRAUMATIC BRAIN INJURY. In: JOURNAL OF NEUROTRAUMA. MARY ANN LIEBERT, INC 140 HUGUENOT STREET, 3RD FL, NEW ROCHELLE, NY 10801 USA; 2019 p. A129–A129.

Zhang D, Song Y, Liu D, Zhang C, Wu Y, Wang H, Zhang F, Xia Y, O’Donnell LJ, Cai W. Efficient 3D Depthwise and Separable Convolutions with Dilation for Brain Tumor Segmentation. In: Australasian Joint Conference on Artificial Intelligence. Springer, Cham; 2019 p. 563–573.

Dalamagkas K, Tsintou M, Rathi Y, O’Donnell LJ, Pasternak O, Gong X, Zhu A, Savadjiev P, Papadimitriou GM, Kubicki M, others. Individual variations of the human corticospinal tract and its hand-related motor fibers using diffusion MRI tractography. Brain imaging and behavior 2019;:1–19.

Zhang F, Ning L, O’Donnell LJ, Pasternak O. MK-curve-Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal. NeuroImage 2019;196:68–80.

Liu D, Zhang D, Song Y, Zhang C, Zhang F, O’Donnell L, Cai W. Nuclei segmentation via a deep panoptic model with semantic feature fusion. In: Proceedings of the 28th International Joint Conference on Artificial Intelligence. AAAI Press; 2019 p. 861–868.

Stojanovski S, Felsky D, Viviano JD, Shahab S, Bangali R, Burton CL, Devenyi GA, O’Donnell LJ, Szatmari P, Chakravarty MM, others. Polygenic risk and neural substrates of attention-deficit/hyperactivity disorder symptoms in youths with a history of mild traumatic brain injury. Biological psychiatry 2019;85(5):408–416.

Fan D, Chaudhari NN, Rostowsky KA, Calvillo M, Lee SK, Chowdhury NF, Zhang F, O’Donnell LJ, Irimia A. Post-Traumatic Cerebral Microhemorrhages and their Effects Upon White Matter Connectivity in the Aging Human Brain. In: 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE; 2019 p. 198–203.

Zhang F, Wu Y, Norton I, Rathi Y, Golby AJ, O’Donnell LJ. Test–retest reproducibility of white matter parcellation using diffusion MRI tractography fiber clustering. Human brain mapping 2019;40(10):3041–3057.

Lyall AE, Savadjiev P, del Re EC, Seitz J, O’Donnell LJ, Westin C-F, Mesholam-Gately RI, Petryshen T, Wojcik JD, Nestor P, others. Utilizing Mutual Information Analysis to Explore the Relationship Between Gray and White Matter Structural Pathologies in Schizophrenia. Schizophrenia bulletin 2019;45(2):386–395.

 

2018

Liu D, Zhang D, Song Y, Zhang F, O’Donnell LJ, Cai W. 3D large kernel anisotropic network for brain tumor segmentation. In: International Conference on Neural Information Processing. Springer, Cham; 2018 p. 444–454.

Zhang F, Wu Y, Norton I, Rigolo L, Rathi Y, Makris N, O’Donnell LJ. An anatomically curated fiber clustering white matter atlas for consistent white matter tract parcellation across the lifespan. NeuroImage 2018;179:429–447.

Stefanik L, Erdman L, Ameis SH, Foussias G, Mulsant BH, Behdinan T, Goldenberg A, O’Donnell LJ, Voineskos AN. Brain-behavior participant similarity networks among youth and emerging adults with schizophrenia spectrum, autism spectrum, or bipolar disorder and matched controls. Neuropsychopharmacology 2018;43(5):1180–1188.